Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis




descargar 8.65 Kb.
títuloAdditional Table 5: Putative contaminants removed from 16S rrna sequence analysis
fecha de publicación22.10.2015
tamaño8.65 Kb.
tipoDocumentos
Additional Table 5: Putative contaminants removed from 16S rRNA sequence analysis. The taxa that were removed due to their higher abundance (4 standard deviations above the mean) in water and blank processed swabs compared to pet and human samples.


Mock Swab Contaminants

Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces

Bacteria;Chlamydiae;Chlamydiae;Chlamydiales;Parachlamydiaceae;Parachlamydia

Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;Trueperaceae;Truepera

Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus

Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Other

Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus

Bacteria;Fusobacteria;Fusobacteria;Fusobacteriales;Leptotrichiaceae;Sneathia

Bacteria;Nitrospira;Nitrospira;Nitrospirales;Nitrospiraceae;Nitrospira

Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Beijerinckiaceae;Chelatococcus

Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bosea

Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Hyphomicrobiaceae;Devosia

Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter

Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Other

Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium

Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingopyxis

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_incertae_sedis;Leptothrix

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Roseateles

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Rhodoferax

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Duganella

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herminiimonas

Bacteria;Proteobacteria;Betaproteobacteria;Hydrogenophilales;Hydrogenophilaceae;Hydrogenophilus

Bacteria;Proteobacteria;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Shinella

Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter

Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea

Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia

Bacteria;Proteobacteria;Gammaproteobacteria;Salinisphaerales;Salinisphaeraceae;Salinisphaera

Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Piscirickettsiaceae;Methylophaga

Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas
Mock PCR Contaminants

Bacteria;Acidobacteria;Acidobacteria_Gp1;Gp1;Other;Other

Bacteria;Acidobacteria;Acidobacteria_Gp16;Gp16;Other;Other

Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Geodermatophilaceae;Other

Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Brevundimonas

Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium

Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Other

Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Other

Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Other

Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Alcaligenes

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Other

Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Pelomonas

Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Cystobacteraceae;Other

Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Other;Other

similar:

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconTable width=862 cellpadding=5

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis icon1List of Criteria and Selected Air Contaminants To Be Used for Public...

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconUnit 3: Atomic Concepts  Quiz 1- periodic table and the atom

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconAdditional file 2: Institutional Review Board details for study sites

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconTaller de artesanía – Crafts Workshop ud 2 Análisis de objetos – Object Analysis

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconAdditional file 1 – List of institutional review boards (irbs) and...

Additional Table 5: Putative contaminants removed from 16S rrna sequence analysis iconEl presente trabajo es una versión revisada y ampliada del que fuera...


Medicina


Todos los derechos reservados. Copyright © 2015
contactos
med.se-todo.com



Home
Cursos
Lecciones
Medicina
Ley
Economía
Periodismo
Cultura física
Biología